Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upb1Q8VC97 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upb1Q8VC97 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upb1Q8VC97 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upb1Q8VC97 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.74■□□□□ 0.59
Upb1Q8VC97 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Upb1Q8VC97 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upb1Q8VC97 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Upb1Q8VC97 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upb1Q8VC97 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upb1Q8VC97 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Upb1Q8VC97 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upb1Q8VC97 Gm18958-201ENSMUST00000174258 762 ntBASIC18.73■□□□□ 0.59
Upb1Q8VC97 Mir1668-201ENSMUST00000184114 107 ntBASIC18.73■□□□□ 0.59
Upb1Q8VC97 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Upb1Q8VC97 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upb1Q8VC97 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Upb1Q8VC97 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Upb1Q8VC97 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upb1Q8VC97 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.73■□□□□ 0.59
Upb1Q8VC97 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.72■□□□□ 0.59
Upb1Q8VC97 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.72■□□□□ 0.59
Upb1Q8VC97 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Upb1Q8VC97 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Gm7213-201ENSMUST00000215977 950 ntBASIC18.71■□□□□ 0.59
Upb1Q8VC97 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upb1Q8VC97 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.7■□□□□ 0.58
Upb1Q8VC97 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Upb1Q8VC97 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Gm27389-201ENSMUST00000183622 195 ntBASIC18.69■□□□□ 0.58
Upb1Q8VC97 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.69■□□□□ 0.58
Upb1Q8VC97 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upb1Q8VC97 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms