Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Gm12896-201ENSMUST00000118430 226 ntBASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Trmt13-210ENSMUST00000198454 880 ntBASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf8Q8VC56 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf8Q8VC56 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf8Q8VC56 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Gm37856-201ENSMUST00000191634 999 ntBASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Rnf8Q8VC56 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Gm27011-201ENSMUST00000182352 972 ntBASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Gm18666-201ENSMUST00000190039 958 ntBASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf8Q8VC56 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Gm10653-202ENSMUST00000139570 835 ntBASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf8Q8VC56 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf8Q8VC56 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms