Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Gm7514-201ENSMUST00000209475 934 ntBASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup35Q8R4R6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nup35Q8R4R6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nup35Q8R4R6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup35Q8R4R6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup35Q8R4R6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup35Q8R4R6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup35Q8R4R6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup35Q8R4R6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup35Q8R4R6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup35Q8R4R6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup35Q8R4R6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup35Q8R4R6 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.08□□□□□ -0.15
Nup35Q8R4R6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup35Q8R4R6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup35Q8R4R6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup35Q8R4R6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup35Q8R4R6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms