Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdt1Q8R4E9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdt1Q8R4E9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdt1Q8R4E9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Cdt1Q8R4E9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdt1Q8R4E9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Timm23-208ENSMUST00000226683 750 ntBASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Odf3b-204ENSMUST00000227834 930 ntBASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdt1Q8R4E9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdt1Q8R4E9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdt1Q8R4E9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Gm10517-202ENSMUST00000192970 758 ntBASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Gm3375-201ENSMUST00000203929 796 ntBASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms