Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Atp2a1Q8R429 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atp2a1Q8R429 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Atp2a1Q8R429 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Atp2a1Q8R429 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp2a1Q8R429 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp2a1Q8R429 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.3■□□□□ 0.68
Atp2a1Q8R429 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.3■□□□□ 0.68
Atp2a1Q8R429 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp2a1Q8R429 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.3■□□□□ 0.68
Atp2a1Q8R429 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp2a1Q8R429 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Atp2a1Q8R429 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Atp2a1Q8R429 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atp2a1Q8R429 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Gm17661-201ENSMUST00000170317 270 ntBASIC19.28■□□□□ 0.68
Atp2a1Q8R429 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Idnk-204ENSMUST00000226010 1898 ntBASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp2a1Q8R429 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp2a1Q8R429 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp2a1Q8R429 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Atp2a1Q8R429 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp2a1Q8R429 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp2a1Q8R429 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp2a1Q8R429 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Atp2a1Q8R429 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp2a1Q8R429 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.27■□□□□ 0.68
Atp2a1Q8R429 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp2a1Q8R429 Mir1668-201ENSMUST00000184114 107 ntBASIC19.27■□□□□ 0.68
Atp2a1Q8R429 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp2a1Q8R429 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp2a1Q8R429 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atp2a1Q8R429 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atp2a1Q8R429 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Atp2a1Q8R429 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp2a1Q8R429 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms