Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpp40Q8R1F9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Gm18959-201ENSMUST00000208954 655 ntBASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpp40Q8R1F9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpp40Q8R1F9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Gm45058-201ENSMUST00000205810 766 ntBASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpp40Q8R1F9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Gm7370-201ENSMUST00000219471 767 ntBASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpp40Q8R1F9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpp40Q8R1F9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Rpp40Q8R1F9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpp40Q8R1F9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms