Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Paf1Q8K2T8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Paf1Q8K2T8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Paf1Q8K2T8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.21■□□□□ 0.83
Paf1Q8K2T8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Paf1Q8K2T8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Gm37025-201ENSMUST00000195159 829 ntBASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Paf1Q8K2T8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Paf1Q8K2T8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Paf1Q8K2T8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Gm17661-201ENSMUST00000170317 270 ntBASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Paf1Q8K2T8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Paf1Q8K2T8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Paf1Q8K2T8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Paf1Q8K2T8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Paf1Q8K2T8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Paf1Q8K2T8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Paf1Q8K2T8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Paf1Q8K2T8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Paf1Q8K2T8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Paf1Q8K2T8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms