Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rftn2Q8CHX7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rftn2Q8CHX7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.33■□□□□ 0.53
Rftn2Q8CHX7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rftn2Q8CHX7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rftn2Q8CHX7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rftn2Q8CHX7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rftn2Q8CHX7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rftn2Q8CHX7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rftn2Q8CHX7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rftn2Q8CHX7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.33■□□□□ 0.52
Rftn2Q8CHX7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rftn2Q8CHX7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rftn2Q8CHX7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.33■□□□□ 0.52
Rftn2Q8CHX7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rftn2Q8CHX7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rftn2Q8CHX7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rftn2Q8CHX7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Gm25016-201ENSMUST00000158399 131 ntBASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rftn2Q8CHX7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rftn2Q8CHX7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Actl10-202ENSMUST00000226583 1501 ntBASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rftn2Q8CHX7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms