Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rdh1Q8CGV4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh1Q8CGV4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rdh1Q8CGV4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh1Q8CGV4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh1Q8CGV4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh1Q8CGV4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh1Q8CGV4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh1Q8CGV4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh1Q8CGV4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh1Q8CGV4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Gm7213-201ENSMUST00000215977 950 ntBASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh1Q8CGV4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rdh1Q8CGV4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Rdh1Q8CGV4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Rdh1Q8CGV4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.77■□□□□ 0.27
Rdh1Q8CGV4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 AA414768-201ENSMUST00000121924 1257 ntBASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Mir1668-201ENSMUST00000184114 107 ntBASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.76■□□□□ 0.27
Rdh1Q8CGV4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh1Q8CGV4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Gm27389-201ENSMUST00000183622 195 ntBASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh1Q8CGV4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms