Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rp1l1Q8CGM2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.96■□□□□ 0.47
Rp1l1Q8CGM2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rp1l1Q8CGM2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.96■□□□□ 0.47
Rp1l1Q8CGM2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rp1l1Q8CGM2 Gm27702-201ENSMUST00000184512 56 ntBASIC17.96■□□□□ 0.47
Rp1l1Q8CGM2 Gm5364-201ENSMUST00000216789 889 ntBASIC17.96■□□□□ 0.47
Rp1l1Q8CGM2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rp1l1Q8CGM2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rp1l1Q8CGM2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rp1l1Q8CGM2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rp1l1Q8CGM2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rp1l1Q8CGM2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rp1l1Q8CGM2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rp1l1Q8CGM2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rp1l1Q8CGM2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rp1l1Q8CGM2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rp1l1Q8CGM2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Rp1l1Q8CGM2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rp1l1Q8CGM2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rp1l1Q8CGM2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rp1l1Q8CGM2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rp1l1Q8CGM2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.94■□□□□ 0.46
Rp1l1Q8CGM2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Gm6376-201ENSMUST00000209407 580 ntBASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rp1l1Q8CGM2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rp1l1Q8CGM2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Gm8000-201ENSMUST00000188378 592 ntBASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.91■□□□□ 0.46
Rp1l1Q8CGM2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Gm5264-201ENSMUST00000190584 848 ntBASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rp1l1Q8CGM2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms