Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.42■□□□□ 0.06
ShfQ8CG80 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ShfQ8CG80 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ShfQ8CG80 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ShfQ8CG80 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.41■□□□□ 0.06
ShfQ8CG80 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ShfQ8CG80 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ShfQ8CG80 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ShfQ8CG80 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ShfQ8CG80 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ShfQ8CG80 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.41■□□□□ 0.06
ShfQ8CG80 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.41■□□□□ 0.06
ShfQ8CG80 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.41■□□□□ 0.06
ShfQ8CG80 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ShfQ8CG80 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ShfQ8CG80 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ShfQ8CG80 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ShfQ8CG80 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ShfQ8CG80 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ShfQ8CG80 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ShfQ8CG80 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.4■□□□□ 0.06
ShfQ8CG80 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ShfQ8CG80 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ShfQ8CG80 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.4■□□□□ 0.06
ShfQ8CG80 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.4■□□□□ 0.06
ShfQ8CG80 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.4■□□□□ 0.06
ShfQ8CG80 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ShfQ8CG80 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ShfQ8CG80 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.4■□□□□ 0.06
ShfQ8CG80 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ShfQ8CG80 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.4■□□□□ 0.06
ShfQ8CG80 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
ShfQ8CG80 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.39■□□□□ 0.05
ShfQ8CG80 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ShfQ8CG80 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.39■□□□□ 0.05
ShfQ8CG80 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.39■□□□□ 0.05
ShfQ8CG80 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.39■□□□□ 0.05
ShfQ8CG80 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
ShfQ8CG80 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.39■□□□□ 0.05
ShfQ8CG80 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.39■□□□□ 0.05
ShfQ8CG80 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ShfQ8CG80 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
ShfQ8CG80 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ShfQ8CG80 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ShfQ8CG80 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ShfQ8CG80 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ShfQ8CG80 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ShfQ8CG80 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
ShfQ8CG80 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ShfQ8CG80 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.38■□□□□ 0.05
ShfQ8CG80 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
ShfQ8CG80 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.38■□□□□ 0.05
ShfQ8CG80 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.38■□□□□ 0.05
ShfQ8CG80 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
ShfQ8CG80 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ShfQ8CG80 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
ShfQ8CG80 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ShfQ8CG80 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ShfQ8CG80 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ShfQ8CG80 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ShfQ8CG80 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
ShfQ8CG80 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms