Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Gm12527-201ENSMUST00000117967 564 ntBASIC19.77■□□□□ 0.76
Smc2Q8CG48 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smc2Q8CG48 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.77■□□□□ 0.76
Smc2Q8CG48 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smc2Q8CG48 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc2Q8CG48 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smc2Q8CG48 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smc2Q8CG48 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Gm12382-201ENSMUST00000122005 922 ntBASIC19.76■□□□□ 0.75
Smc2Q8CG48 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc2Q8CG48 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.75■□□□□ 0.75
Smc2Q8CG48 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Smc2Q8CG48 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Smc2Q8CG48 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.75■□□□□ 0.75
Smc2Q8CG48 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc2Q8CG48 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.75■□□□□ 0.75
Smc2Q8CG48 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.74■□□□□ 0.75
Smc2Q8CG48 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.74■□□□□ 0.75
Smc2Q8CG48 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc2Q8CG48 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.74■□□□□ 0.75
Smc2Q8CG48 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc2Q8CG48 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Gm37292-201ENSMUST00000192062 758 ntBASIC19.73■□□□□ 0.75
Smc2Q8CG48 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.73■□□□□ 0.75
Smc2Q8CG48 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc2Q8CG48 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.73■□□□□ 0.75
Smc2Q8CG48 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc2Q8CG48 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc2Q8CG48 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms