Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Gm11249-201ENSMUST00000117071 859 ntBASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Vcpip1Q8CDG3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcpip1Q8CDG3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Gm15375-201ENSMUST00000119510 849 ntBASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcpip1Q8CDG3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Mir6982-201ENSMUST00000184354 68 ntBASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Vcpip1Q8CDG3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vcpip1Q8CDG3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
Vcpip1Q8CDG3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.52■□□□□ 0.56
Vcpip1Q8CDG3 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.52■□□□□ 0.56
Vcpip1Q8CDG3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vcpip1Q8CDG3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Vcpip1Q8CDG3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vcpip1Q8CDG3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Vcpip1Q8CDG3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Vcpip1Q8CDG3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Vcpip1Q8CDG3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vcpip1Q8CDG3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Gm37856-201ENSMUST00000191634 999 ntBASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Gm7977-201ENSMUST00000193787 748 ntBASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms