Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Alx1Q8C8B0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.17■□□□□ 0.82
Alx1Q8C8B0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Alx1Q8C8B0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx1Q8C8B0 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.15■□□□□ 0.82
Alx1Q8C8B0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx1Q8C8B0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx1Q8C8B0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Alx1Q8C8B0 Mir5130-201ENSMUST00000175160 84 ntBASIC20.15■□□□□ 0.82
Alx1Q8C8B0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.15■□□□□ 0.82
Alx1Q8C8B0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Alx1Q8C8B0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx1Q8C8B0 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.15■□□□□ 0.82
Alx1Q8C8B0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Alx1Q8C8B0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx1Q8C8B0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx1Q8C8B0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alx1Q8C8B0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.14■□□□□ 0.82
Alx1Q8C8B0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Alx1Q8C8B0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Alx1Q8C8B0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Alx1Q8C8B0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Alx1Q8C8B0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Alx1Q8C8B0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Alx1Q8C8B0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Alx1Q8C8B0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Alx1Q8C8B0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Alx1Q8C8B0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Alx1Q8C8B0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Alx1Q8C8B0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alx1Q8C8B0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alx1Q8C8B0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alx1Q8C8B0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alx1Q8C8B0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alx1Q8C8B0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.11■□□□□ 0.81
Alx1Q8C8B0 Gm18032-201ENSMUST00000222541 538 ntBASIC20.11■□□□□ 0.81
Alx1Q8C8B0 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.11■□□□□ 0.81
Alx1Q8C8B0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.11■□□□□ 0.81
Alx1Q8C8B0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Alx1Q8C8B0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Alx1Q8C8B0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms