Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Aph1bQ8C7N7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Aph1bQ8C7N7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Aph1bQ8C7N7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Aph1bQ8C7N7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Aph1bQ8C7N7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Aph1bQ8C7N7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Aph1bQ8C7N7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.08■□□□□ 0.32
Aph1bQ8C7N7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.08■□□□□ 0.32
Aph1bQ8C7N7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Aph1bQ8C7N7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Aph1bQ8C7N7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Aph1bQ8C7N7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Aph1bQ8C7N7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Aph1bQ8C7N7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Aph1bQ8C7N7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Gm37292-201ENSMUST00000192062 758 ntBASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Gm20049-201ENSMUST00000219950 730 ntBASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Aph1bQ8C7N7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Aph1bQ8C7N7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Aph1bQ8C7N7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Aph1bQ8C7N7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms