Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim9Q8C7M3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Gm17661-201ENSMUST00000170317 270 ntBASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim9Q8C7M3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim9Q8C7M3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Gm715-201ENSMUST00000117865 831 ntBASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Gm37025-201ENSMUST00000195159 829 ntBASIC19.01■□□□□ 0.63
Trim9Q8C7M3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim9Q8C7M3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Trim9Q8C7M3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19■□□□□ 0.63
Trim9Q8C7M3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Trim9Q8C7M3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19■□□□□ 0.63
Trim9Q8C7M3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19■□□□□ 0.63
Trim9Q8C7M3 Gm38027-201ENSMUST00000192315 235 ntBASIC19■□□□□ 0.63
Trim9Q8C7M3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19■□□□□ 0.63
Trim9Q8C7M3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trim9Q8C7M3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Trim9Q8C7M3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim9Q8C7M3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim9Q8C7M3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Gm10812-201ENSMUST00000099864 546 ntBASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim9Q8C7M3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms