Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm37025-201ENSMUST00000195159 829 ntBASIC22.02■■□□□ 1.12
Ccdc60Q8C4J0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc60Q8C4J0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc60Q8C4J0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc60Q8C4J0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc60Q8C4J0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ccdc60Q8C4J0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC22.02■■□□□ 1.12
Ccdc60Q8C4J0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ccdc60Q8C4J0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ccdc60Q8C4J0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc60Q8C4J0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ccdc60Q8C4J0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc60Q8C4J0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Gm17661-201ENSMUST00000170317 270 ntBASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Gm30025-201ENSMUST00000218555 728 ntBASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc60Q8C4J0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.97■■□□□ 1.11
Ccdc60Q8C4J0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc60Q8C4J0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.97■■□□□ 1.11
Ccdc60Q8C4J0 Gm9731-201ENSMUST00000209480 747 ntBASIC21.97■■□□□ 1.11
Ccdc60Q8C4J0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.97■■□□□ 1.11
Ccdc60Q8C4J0 Gm7791-201ENSMUST00000219066 539 ntBASIC21.97■■□□□ 1.11
Ccdc60Q8C4J0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc60Q8C4J0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc60Q8C4J0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc60Q8C4J0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc60Q8C4J0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc60Q8C4J0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.96■■□□□ 1.11
Ccdc60Q8C4J0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc60Q8C4J0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc60Q8C4J0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.96■■□□□ 1.11
Ccdc60Q8C4J0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc60Q8C4J0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms