Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp43Q8BUM9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Gm715-201ENSMUST00000117865 831 ntBASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp43Q8BUM9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp43Q8BUM9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp43Q8BUM9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp43Q8BUM9 Gm38027-201ENSMUST00000192315 235 ntBASIC17.46■□□□□ 0.39
Usp43Q8BUM9 Gm37025-201ENSMUST00000195159 829 ntBASIC17.46■□□□□ 0.39
Usp43Q8BUM9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp43Q8BUM9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Usp43Q8BUM9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp43Q8BUM9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.46■□□□□ 0.39
Usp43Q8BUM9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp43Q8BUM9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp43Q8BUM9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp43Q8BUM9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Usp43Q8BUM9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Gm17661-201ENSMUST00000170317 270 ntBASIC17.45■□□□□ 0.38
Usp43Q8BUM9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Usp43Q8BUM9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Timm23-208ENSMUST00000226683 750 ntBASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp43Q8BUM9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp43Q8BUM9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms