Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf7Q8BTV2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf7Q8BTV2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf7Q8BTV2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf7Q8BTV2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Zfp783-201ENSMUST00000095946 670 ntBASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.28■□□□□ 0.36
Cpsf7Q8BTV2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 Gm10602-201ENSMUST00000098239 609 ntBASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf7Q8BTV2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpsf7Q8BTV2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpsf7Q8BTV2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpsf7Q8BTV2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cpsf7Q8BTV2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpsf7Q8BTV2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpsf7Q8BTV2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf7Q8BTV2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Gm13401-201ENSMUST00000117074 291 ntBASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Mir2861-201ENSMUST00000175539 82 ntBASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf7Q8BTV2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf7Q8BTV2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf7Q8BTV2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Cpsf7Q8BTV2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf7Q8BTV2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.23■□□□□ 0.35
Cpsf7Q8BTV2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf7Q8BTV2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms