Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Gm30025-201ENSMUST00000218555 728 ntBASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.28■□□□□ 0.52
Pum3Q8BKS9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pum3Q8BKS9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Pum3Q8BKS9 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.27■□□□□ 0.51
Pum3Q8BKS9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pum3Q8BKS9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pum3Q8BKS9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pum3Q8BKS9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.27■□□□□ 0.51
Pum3Q8BKS9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.27■□□□□ 0.51
Pum3Q8BKS9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Gm17661-201ENSMUST00000170317 270 ntBASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Gm27463-201ENSMUST00000183569 57 ntBASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Gm9731-201ENSMUST00000209480 747 ntBASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pum3Q8BKS9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pum3Q8BKS9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pum3Q8BKS9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms