Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp1Q8BJQ2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Usp1Q8BJQ2 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.33■□□□□ 0.52
Usp1Q8BJQ2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp1Q8BJQ2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp1Q8BJQ2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp1Q8BJQ2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.33■□□□□ 0.52
Usp1Q8BJQ2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp1Q8BJQ2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Usp1Q8BJQ2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.32■□□□□ 0.52
Usp1Q8BJQ2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Usp1Q8BJQ2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Gm9013-201ENSMUST00000132939 882 ntBASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp1Q8BJQ2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Gm5587-201ENSMUST00000206270 674 ntBASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp1Q8BJQ2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Gm17661-201ENSMUST00000170317 270 ntBASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.28■□□□□ 0.52
Usp1Q8BJQ2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp1Q8BJQ2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms