Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1bQ8BH88 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Depdc1bQ8BH88 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.77■□□□□ 0.59
Depdc1bQ8BH88 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.77■□□□□ 0.59
Depdc1bQ8BH88 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Depdc1bQ8BH88 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Mir6349-201ENSMUST00000184059 97 ntBASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Mir8112-201ENSMUST00000184382 131 ntBASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1bQ8BH88 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Gm13401-201ENSMUST00000117074 291 ntBASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Depdc1bQ8BH88 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Depdc1bQ8BH88 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Depdc1bQ8BH88 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Gm7977-201ENSMUST00000193787 748 ntBASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms