Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samm50Q8BGH2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samm50Q8BGH2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samm50Q8BGH2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samm50Q8BGH2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Samm50Q8BGH2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.21■□□□□ 0.83
Samm50Q8BGH2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Samm50Q8BGH2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.21■□□□□ 0.83
Samm50Q8BGH2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samm50Q8BGH2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samm50Q8BGH2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Gm10138-203ENSMUST00000206952 366 ntBASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.2■□□□□ 0.82
Samm50Q8BGH2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Samm50Q8BGH2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Gm10698-201ENSMUST00000182663 604 ntBASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samm50Q8BGH2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms