Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.34■□□□□ 0.53
Trim6Q8BGE7 AV356131-201ENSMUST00000206201 750 ntBASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim6Q8BGE7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim6Q8BGE7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim6Q8BGE7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim6Q8BGE7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim6Q8BGE7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim6Q8BGE7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim6Q8BGE7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim6Q8BGE7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Trim6Q8BGE7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim6Q8BGE7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim6Q8BGE7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim6Q8BGE7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim6Q8BGE7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim6Q8BGE7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
Trim6Q8BGE7 Gm6365-201ENSMUST00000054711 744 ntBASIC18.33■□□□□ 0.52
Trim6Q8BGE7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim6Q8BGE7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim6Q8BGE7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim6Q8BGE7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim6Q8BGE7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim6Q8BGE7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim6Q8BGE7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Gm38285-201ENSMUST00000192928 922 ntBASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Gm5874-201ENSMUST00000096101 508 ntBASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim6Q8BGE7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Gm29791-202ENSMUST00000207888 369 ntBASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim6Q8BGE7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms