Protein–RNA interactions for Protein: Q8BFX1

Rnf187, E3 ubiquitin-protein ligase RNF187, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf187Q8BFX1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf187Q8BFX1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf187Q8BFX1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf187Q8BFX1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rnf187Q8BFX1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rnf187Q8BFX1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf187Q8BFX1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf187Q8BFX1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf187Q8BFX1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf187Q8BFX1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf187Q8BFX1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rnf187Q8BFX1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf187Q8BFX1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf187Q8BFX1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf187Q8BFX1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf187Q8BFX1 Gm2399-201ENSMUST00000104944 225 ntBASIC18.58■□□□□ 0.56
Rnf187Q8BFX1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.58■□□□□ 0.56
Rnf187Q8BFX1 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.58■□□□□ 0.56
Rnf187Q8BFX1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf187Q8BFX1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf187Q8BFX1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf187Q8BFX1 Tgds-204ENSMUST00000228543 1594 ntBASIC18.58■□□□□ 0.56
Rnf187Q8BFX1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf187Q8BFX1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rnf187Q8BFX1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf187Q8BFX1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rnf187Q8BFX1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf187Q8BFX1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf187Q8BFX1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms