Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc28Q80XJ3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Idnk-204ENSMUST00000226010 1898 ntBASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc28Q80XJ3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Mir5126-201ENSMUST00000175513 77 ntBASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ttc28Q80XJ3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ttc28Q80XJ3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.46□□□□□ -0.1
Ttc28Q80XJ3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.46□□□□□ -0.1
Ttc28Q80XJ3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.46□□□□□ -0.1
Ttc28Q80XJ3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ttc28Q80XJ3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.46□□□□□ -0.1
Ttc28Q80XJ3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.46□□□□□ -0.1
Ttc28Q80XJ3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.46□□□□□ -0.1
Ttc28Q80XJ3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.46□□□□□ -0.1
Ttc28Q80XJ3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ttc28Q80XJ3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ttc28Q80XJ3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm44357-201ENSMUST00000195897 142 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm19658-201ENSMUST00000196231 138 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm44367-201ENSMUST00000196836 138 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm44350-201ENSMUST00000197197 138 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm44390-201ENSMUST00000197533 144 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm44313-201ENSMUST00000198018 138 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm44486-201ENSMUST00000198508 138 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm44454-201ENSMUST00000198541 138 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm44314-201ENSMUST00000199263 138 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm44394-201ENSMUST00000199558 138 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm44484-201ENSMUST00000199873 138 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm44466-201ENSMUST00000200264 138 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms