Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vrk1Q80X41 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vrk1Q80X41 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.47■□□□□ 0.23
Vrk1Q80X41 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vrk1Q80X41 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.47■□□□□ 0.23
Vrk1Q80X41 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vrk1Q80X41 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vrk1Q80X41 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vrk1Q80X41 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Gm5587-201ENSMUST00000206270 674 ntBASIC16.46■□□□□ 0.23
Vrk1Q80X41 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vrk1Q80X41 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.46■□□□□ 0.22
Vrk1Q80X41 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vrk1Q80X41 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Vrk1Q80X41 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Gm9013-201ENSMUST00000132939 882 ntBASIC16.45■□□□□ 0.22
Vrk1Q80X41 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Gm7213-201ENSMUST00000215977 950 ntBASIC16.45■□□□□ 0.22
Vrk1Q80X41 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vrk1Q80X41 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vrk1Q80X41 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.43■□□□□ 0.22
Vrk1Q80X41 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Gm27704-201ENSMUST00000185094 107 ntBASIC16.43■□□□□ 0.22
Vrk1Q80X41 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Vrk1Q80X41 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vrk1Q80X41 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms