Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tspan18Q80WR1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tspan18Q80WR1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tspan18Q80WR1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tspan18Q80WR1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tspan18Q80WR1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.33■□□□□ 0.52
Tspan18Q80WR1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tspan18Q80WR1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tspan18Q80WR1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tspan18Q80WR1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tspan18Q80WR1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Gm26039-201ENSMUST00000158152 144 ntBASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Gm23634-201ENSMUST00000175071 91 ntBASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tspan18Q80WR1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tspan18Q80WR1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tspan18Q80WR1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tspan18Q80WR1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tspan18Q80WR1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms