Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.69■□□□□ 0.26
Trim36Q80WG7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim36Q80WG7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.68■□□□□ 0.26
Trim36Q80WG7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Gm2559-201ENSMUST00000201323 363 ntBASIC16.68■□□□□ 0.26
Trim36Q80WG7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim36Q80WG7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim36Q80WG7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.67■□□□□ 0.26
Trim36Q80WG7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Gm10812-201ENSMUST00000099864 546 ntBASIC16.67■□□□□ 0.26
Trim36Q80WG7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim36Q80WG7 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.66■□□□□ 0.26
Trim36Q80WG7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim36Q80WG7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.66■□□□□ 0.26
Trim36Q80WG7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Gm44549-201ENSMUST00000208351 577 ntBASIC16.66■□□□□ 0.26
Trim36Q80WG7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim36Q80WG7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Dio3-201ENSMUST00000097228 1449 ntBASIC16.66■□□□□ 0.26
Trim36Q80WG7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim36Q80WG7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim36Q80WG7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.65■□□□□ 0.26
Trim36Q80WG7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim36Q80WG7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Trim36Q80WG7 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.64■□□□□ 0.25
Trim36Q80WG7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim36Q80WG7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim36Q80WG7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim36Q80WG7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim36Q80WG7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms