Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf40bQ80W14 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf40bQ80W14 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 Gm5587-201ENSMUST00000206270 674 ntBASIC19.88■□□□□ 0.77
Prpf40bQ80W14 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf40bQ80W14 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Gm29518-201ENSMUST00000190858 372 ntBASIC19.87■□□□□ 0.77
Prpf40bQ80W14 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Tgds-204ENSMUST00000228543 1594 ntBASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf40bQ80W14 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf40bQ80W14 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Prpf40bQ80W14 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Prpf40bQ80W14 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf40bQ80W14 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.86■□□□□ 0.77
Prpf40bQ80W14 Gm16061-201ENSMUST00000122167 857 ntBASIC19.86■□□□□ 0.77
Prpf40bQ80W14 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.86■□□□□ 0.77
Prpf40bQ80W14 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Prpf40bQ80W14 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.86■□□□□ 0.77
Prpf40bQ80W14 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf40bQ80W14 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf40bQ80W14 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Gm21559-201ENSMUST00000220638 855 ntBASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Gm8587-201ENSMUST00000076538 843 ntBASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf40bQ80W14 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf40bQ80W14 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf40bQ80W14 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.83■□□□□ 0.77
Prpf40bQ80W14 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf40bQ80W14 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf40bQ80W14 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf40bQ80W14 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf40bQ80W14 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf40bQ80W14 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prpf40bQ80W14 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.83■□□□□ 0.76
Prpf40bQ80W14 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Gm27389-201ENSMUST00000183622 195 ntBASIC19.82■□□□□ 0.76
Prpf40bQ80W14 Mzt1-203ENSMUST00000227948 952 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms