Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vps13bQ80TY5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vps13bQ80TY5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vps13bQ80TY5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vps13bQ80TY5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Vps13bQ80TY5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.32□□□□□ -0.76
Vps13bQ80TY5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Vps13bQ80TY5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Vps13bQ80TY5 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.32□□□□□ -0.76
Vps13bQ80TY5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Vps13bQ80TY5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vps13bQ80TY5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Vps13bQ80TY5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Gm43438-201ENSMUST00000198133 379 ntBASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Chchd1-203ENSMUST00000224633 557 ntBASIC10.31□□□□□ -0.76
Vps13bQ80TY5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Vps13bQ80TY5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Gm6296-201ENSMUST00000222599 943 ntBASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Gm43213-201ENSMUST00000151866 1790 ntBASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Gm15165-201ENSMUST00000118140 502 ntBASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Vps13bQ80TY5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Rprl3-201ENSMUST00000157400 290 ntBASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Gm6376-201ENSMUST00000209407 580 ntBASIC10.29□□□□□ -0.76
Vps13bQ80TY5 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Vps13bQ80TY5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms