Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx4Q7TNK1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rfx4Q7TNK1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx4Q7TNK1 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx4Q7TNK1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx4Q7TNK1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx4Q7TNK1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.58■□□□□ 0.24
Rfx4Q7TNK1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx4Q7TNK1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx4Q7TNK1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.58■□□□□ 0.24
Rfx4Q7TNK1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx4Q7TNK1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx4Q7TNK1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.58■□□□□ 0.24
Rfx4Q7TNK1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Rfx4Q7TNK1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx4Q7TNK1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Rfx4Q7TNK1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rfx4Q7TNK1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx4Q7TNK1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Gm38285-201ENSMUST00000192928 922 ntBASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms