Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.82■□□□□ 0.28
Scn4bQ7M729 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Gm22240-201ENSMUST00000175225 82 ntBASIC16.82■□□□□ 0.28
Scn4bQ7M729 Gm10517-202ENSMUST00000192970 758 ntBASIC16.82■□□□□ 0.28
Scn4bQ7M729 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Gm4974-201ENSMUST00000209974 875 ntBASIC16.82■□□□□ 0.28
Scn4bQ7M729 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn4bQ7M729 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn4bQ7M729 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn4bQ7M729 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Scn4bQ7M729 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn4bQ7M729 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.79■□□□□ 0.28
Scn4bQ7M729 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn4bQ7M729 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.78■□□□□ 0.28
Scn4bQ7M729 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn4bQ7M729 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms