Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snd1Q78PY7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Snd1Q78PY7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Snd1Q78PY7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snd1Q78PY7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snd1Q78PY7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Snd1Q78PY7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Snd1Q78PY7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snd1Q78PY7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Snd1Q78PY7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Snd1Q78PY7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snd1Q78PY7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snd1Q78PY7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.81■□□□□ 0.6
Snd1Q78PY7 Gm12527-201ENSMUST00000117967 564 ntBASIC18.81■□□□□ 0.6
Snd1Q78PY7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.81■□□□□ 0.6
Snd1Q78PY7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snd1Q78PY7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.8■□□□□ 0.6
Snd1Q78PY7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.8■□□□□ 0.6
Snd1Q78PY7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Snd1Q78PY7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Snd1Q78PY7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Snd1Q78PY7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snd1Q78PY7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snd1Q78PY7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snd1Q78PY7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Snd1Q78PY7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snd1Q78PY7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snd1Q78PY7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snd1Q78PY7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snd1Q78PY7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snd1Q78PY7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snd1Q78PY7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Snd1Q78PY7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Snd1Q78PY7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snd1Q78PY7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snd1Q78PY7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snd1Q78PY7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snd1Q78PY7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snd1Q78PY7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snd1Q78PY7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms