Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup98Q6PFD9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup98Q6PFD9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Nup98Q6PFD9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup98Q6PFD9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup98Q6PFD9 Gm7153-201ENSMUST00000117092 455 ntBASIC20.36■□□□□ 0.85
Nup98Q6PFD9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nup98Q6PFD9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.36■□□□□ 0.85
Nup98Q6PFD9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup98Q6PFD9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nup98Q6PFD9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup98Q6PFD9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup98Q6PFD9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Nup98Q6PFD9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup98Q6PFD9 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.35■□□□□ 0.85
Nup98Q6PFD9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup98Q6PFD9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.35■□□□□ 0.85
Nup98Q6PFD9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Nup98Q6PFD9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup98Q6PFD9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup98Q6PFD9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup98Q6PFD9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup98Q6PFD9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nup98Q6PFD9 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.33■□□□□ 0.85
Nup98Q6PFD9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.33■□□□□ 0.85
Nup98Q6PFD9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Nup98Q6PFD9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup98Q6PFD9 Gm6623-201ENSMUST00000173570 544 ntBASIC20.33■□□□□ 0.85
Nup98Q6PFD9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nup98Q6PFD9 Gm27742-201ENSMUST00000184667 60 ntBASIC20.33■□□□□ 0.85
Nup98Q6PFD9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup98Q6PFD9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup98Q6PFD9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nup98Q6PFD9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Gm45328-201ENSMUST00000210942 917 ntBASIC20.32■□□□□ 0.84
Nup98Q6PFD9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Gm34391-201ENSMUST00000203706 907 ntBASIC20.32■□□□□ 0.84
Nup98Q6PFD9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nup98Q6PFD9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup98Q6PFD9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup98Q6PFD9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup98Q6PFD9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Nup98Q6PFD9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Nup98Q6PFD9 Gm8969-201ENSMUST00000199694 526 ntBASIC20.3■□□□□ 0.84
Nup98Q6PFD9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup98Q6PFD9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nup98Q6PFD9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nup98Q6PFD9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms