Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dhx40Q6PE54 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dhx40Q6PE54 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dhx40Q6PE54 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Dhx40Q6PE54 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dhx40Q6PE54 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Mir5133-201ENSMUST00000174955 77 ntBASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Dhx40Q6PE54 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Dhx40Q6PE54 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
Dhx40Q6PE54 Dancr-204ENSMUST00000132389 2347 ntBASIC19.14■□□□□ 0.66
Dhx40Q6PE54 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Dhx40Q6PE54 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dhx40Q6PE54 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dhx40Q6PE54 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms