Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Abcf1Q6P542 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf1Q6P542 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Abcf1Q6P542 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Abcf1Q6P542 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf1Q6P542 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf1Q6P542 Gm12527-201ENSMUST00000117967 564 ntBASIC19.34■□□□□ 0.69
Abcf1Q6P542 Gm20760-201ENSMUST00000179197 648 ntBASIC19.34■□□□□ 0.69
Abcf1Q6P542 Gm2559-201ENSMUST00000201323 363 ntBASIC19.34■□□□□ 0.69
Abcf1Q6P542 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Abcf1Q6P542 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.34■□□□□ 0.69
Abcf1Q6P542 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Abcf1Q6P542 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.34■□□□□ 0.69
Abcf1Q6P542 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf1Q6P542 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcf1Q6P542 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abcf1Q6P542 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abcf1Q6P542 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abcf1Q6P542 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abcf1Q6P542 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abcf1Q6P542 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abcf1Q6P542 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Abcf1Q6P542 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Abcf1Q6P542 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abcf1Q6P542 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abcf1Q6P542 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Abcf1Q6P542 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Abcf1Q6P542 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abcf1Q6P542 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Abcf1Q6P542 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Gm10653-202ENSMUST00000139570 835 ntBASIC19.32■□□□□ 0.68
Abcf1Q6P542 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.32■□□□□ 0.68
Abcf1Q6P542 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Abcf1Q6P542 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
Abcf1Q6P542 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abcf1Q6P542 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abcf1Q6P542 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.3■□□□□ 0.68
Abcf1Q6P542 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abcf1Q6P542 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abcf1Q6P542 Gm12896-201ENSMUST00000118430 226 ntBASIC19.3■□□□□ 0.68
Abcf1Q6P542 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abcf1Q6P542 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.3■□□□□ 0.68
Abcf1Q6P542 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abcf1Q6P542 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Abcf1Q6P542 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abcf1Q6P542 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abcf1Q6P542 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Abcf1Q6P542 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Abcf1Q6P542 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Abcf1Q6P542 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Abcf1Q6P542 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.29■□□□□ 0.68
Abcf1Q6P542 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms