Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retreg2Q6NS82 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retreg2Q6NS82 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.58■□□□□ 0.56
Retreg2Q6NS82 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retreg2Q6NS82 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retreg2Q6NS82 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Retreg2Q6NS82 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retreg2Q6NS82 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Gm9987-201ENSMUST00000069768 567 ntBASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg2Q6NS82 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retreg2Q6NS82 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retreg2Q6NS82 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Retreg2Q6NS82 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retreg2Q6NS82 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.56■□□□□ 0.56
Retreg2Q6NS82 Gm37292-201ENSMUST00000192062 758 ntBASIC18.56■□□□□ 0.56
Retreg2Q6NS82 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retreg2Q6NS82 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.56■□□□□ 0.56
Retreg2Q6NS82 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retreg2Q6NS82 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retreg2Q6NS82 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retreg2Q6NS82 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retreg2Q6NS82 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retreg2Q6NS82 Idnk-204ENSMUST00000226010 1898 ntBASIC18.54■□□□□ 0.56
Retreg2Q6NS82 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Gm12382-201ENSMUST00000122005 922 ntBASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Gm43799-201ENSMUST00000201845 579 ntBASIC18.54■□□□□ 0.56
Retreg2Q6NS82 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retreg2Q6NS82 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retreg2Q6NS82 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retreg2Q6NS82 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms