Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.77■□□□□ 0.27
Pcdhga7Q6DD96 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga7Q6DD96 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga7Q6DD96 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga7Q6DD96 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Gm12896-201ENSMUST00000118430 226 ntBASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Gm15375-201ENSMUST00000119510 849 ntBASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Gm11643-201ENSMUST00000119578 864 ntBASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga7Q6DD96 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Gm11249-201ENSMUST00000117071 859 ntBASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Gm10602-201ENSMUST00000098239 609 ntBASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga7Q6DD96 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms