Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ctnna3Q65CL1 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Gm7367-201ENSMUST00000057611 492 ntBASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctnna3Q65CL1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ctnna3Q65CL1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ctnna3Q65CL1 Gm29791-202ENSMUST00000207888 369 ntBASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctnna3Q65CL1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Gm43183-201ENSMUST00000200632 547 ntBASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Gm10819-201ENSMUST00000099988 561 ntBASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctnna3Q65CL1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Gm6659-201ENSMUST00000174752 547 ntBASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctnna3Q65CL1 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms