Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AtmQ62388 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.34■□□□□ 0.21
AtmQ62388 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AtmQ62388 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AtmQ62388 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AtmQ62388 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
AtmQ62388 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AtmQ62388 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AtmQ62388 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AtmQ62388 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
AtmQ62388 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
AtmQ62388 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AtmQ62388 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.33■□□□□ 0.21
AtmQ62388 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AtmQ62388 Psmb5-202ENSMUST00000227257 622 ntBASIC16.33■□□□□ 0.21
AtmQ62388 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
AtmQ62388 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AtmQ62388 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AtmQ62388 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.33■□□□□ 0.2
AtmQ62388 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.33■□□□□ 0.2
AtmQ62388 Gm10576-201ENSMUST00000191927 825 ntBASIC16.33■□□□□ 0.2
AtmQ62388 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AtmQ62388 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AtmQ62388 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.32■□□□□ 0.2
AtmQ62388 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
AtmQ62388 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AtmQ62388 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
AtmQ62388 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AtmQ62388 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AtmQ62388 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
AtmQ62388 Gm25911-201ENSMUST00000157621 56 ntBASIC16.32■□□□□ 0.2
AtmQ62388 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.32■□□□□ 0.2
AtmQ62388 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.32■□□□□ 0.2
AtmQ62388 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AtmQ62388 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AtmQ62388 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AtmQ62388 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AtmQ62388 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.32■□□□□ 0.2
AtmQ62388 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AtmQ62388 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.32■□□□□ 0.2
AtmQ62388 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AtmQ62388 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AtmQ62388 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AtmQ62388 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AtmQ62388 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AtmQ62388 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AtmQ62388 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.31■□□□□ 0.2
AtmQ62388 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AtmQ62388 Gm44357-201ENSMUST00000195897 142 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm19658-201ENSMUST00000196231 138 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm44367-201ENSMUST00000196836 138 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm44350-201ENSMUST00000197197 138 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm44390-201ENSMUST00000197533 144 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm44313-201ENSMUST00000198018 138 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm44486-201ENSMUST00000198508 138 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm44454-201ENSMUST00000198541 138 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm44314-201ENSMUST00000199263 138 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm44394-201ENSMUST00000199558 138 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm44484-201ENSMUST00000199873 138 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm44466-201ENSMUST00000200264 138 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm44359-201ENSMUST00000200671 138 ntBASIC16.31■□□□□ 0.2
AtmQ62388 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AtmQ62388 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
AtmQ62388 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AtmQ62388 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
AtmQ62388 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
AtmQ62388 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
AtmQ62388 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AtmQ62388 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.31■□□□□ 0.2
AtmQ62388 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AtmQ62388 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AtmQ62388 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AtmQ62388 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.31■□□□□ 0.2
AtmQ62388 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AtmQ62388 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AtmQ62388 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AtmQ62388 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AtmQ62388 Gm7862-201ENSMUST00000121461 292 ntBASIC16.3■□□□□ 0.2
AtmQ62388 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.3■□□□□ 0.2
AtmQ62388 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AtmQ62388 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AtmQ62388 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AtmQ62388 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AtmQ62388 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AtmQ62388 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
AtmQ62388 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.3■□□□□ 0.2
AtmQ62388 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.3■□□□□ 0.2
AtmQ62388 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.3■□□□□ 0.2
AtmQ62388 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AtmQ62388 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.3■□□□□ 0.2
AtmQ62388 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AtmQ62388 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
AtmQ62388 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
AtmQ62388 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms