Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cln3Q61124 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cln3Q61124 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cln3Q61124 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cln3Q61124 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln3Q61124 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln3Q61124 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln3Q61124 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln3Q61124 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln3Q61124 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cln3Q61124 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cln3Q61124 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cln3Q61124 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cln3Q61124 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Cln3Q61124 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cln3Q61124 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cln3Q61124 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Cln3Q61124 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln3Q61124 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln3Q61124 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln3Q61124 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cln3Q61124 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cln3Q61124 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Cln3Q61124 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cln3Q61124 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.92■□□□□ 0.62
Cln3Q61124 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cln3Q61124 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cln3Q61124 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.92■□□□□ 0.62
Cln3Q61124 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.92■□□□□ 0.62
Cln3Q61124 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.92■□□□□ 0.62
Cln3Q61124 Gm44771-201ENSMUST00000206975 626 ntBASIC18.92■□□□□ 0.62
Cln3Q61124 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cln3Q61124 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cln3Q61124 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cln3Q61124 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cln3Q61124 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cln3Q61124 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cln3Q61124 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cln3Q61124 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.91■□□□□ 0.62
Cln3Q61124 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cln3Q61124 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cln3Q61124 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cln3Q61124 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cln3Q61124 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cln3Q61124 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cln3Q61124 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.91■□□□□ 0.62
Cln3Q61124 Gm11336-201ENSMUST00000118168 334 ntBASIC18.91■□□□□ 0.62
Cln3Q61124 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.91■□□□□ 0.62
Cln3Q61124 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cln3Q61124 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Cln3Q61124 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cln3Q61124 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cln3Q61124 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cln3Q61124 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Cln3Q61124 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cln3Q61124 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.9■□□□□ 0.62
Cln3Q61124 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cln3Q61124 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.9■□□□□ 0.62
Cln3Q61124 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Cln3Q61124 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.9■□□□□ 0.62
Cln3Q61124 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cln3Q61124 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.9■□□□□ 0.62
Cln3Q61124 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cln3Q61124 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.89■□□□□ 0.61
Cln3Q61124 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cln3Q61124 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cln3Q61124 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cln3Q61124 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln3Q61124 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cln3Q61124 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln3Q61124 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln3Q61124 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Cln3Q61124 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cln3Q61124 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cln3Q61124 Birc2-201ENSMUST00000054878 378 ntBASIC18.88■□□□□ 0.61
Cln3Q61124 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Cln3Q61124 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms