Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxf1Q61080 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxf1Q61080 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Foxf1Q61080 Gm13168-201ENSMUST00000121771 632 ntBASIC14.44□□□□□ -0.1
Foxf1Q61080 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.44□□□□□ -0.1
Foxf1Q61080 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxf1Q61080 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Foxf1Q61080 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxf1Q61080 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.44□□□□□ -0.1
Foxf1Q61080 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxf1Q61080 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxf1Q61080 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxf1Q61080 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Foxf1Q61080 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Foxf1Q61080 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Foxf1Q61080 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxf1Q61080 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Foxf1Q61080 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxf1Q61080 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.43□□□□□ -0.1
Foxf1Q61080 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Foxf1Q61080 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Gm10698-201ENSMUST00000182663 604 ntBASIC14.43□□□□□ -0.1
Foxf1Q61080 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Foxf1Q61080 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Foxf1Q61080 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxf1Q61080 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.42□□□□□ -0.1
Foxf1Q61080 Gm12382-201ENSMUST00000122005 922 ntBASIC14.42□□□□□ -0.1
Foxf1Q61080 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Gm43183-201ENSMUST00000200632 547 ntBASIC14.42□□□□□ -0.1
Foxf1Q61080 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.42□□□□□ -0.1
Foxf1Q61080 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.42□□□□□ -0.1
Foxf1Q61080 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Foxf1Q61080 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Foxf1Q61080 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxf1Q61080 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Foxf1Q61080 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.41□□□□□ -0.1
Foxf1Q61080 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.41□□□□□ -0.1
Foxf1Q61080 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.41□□□□□ -0.1
Foxf1Q61080 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.41□□□□□ -0.1
Foxf1Q61080 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Foxf1Q61080 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Foxf1Q61080 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.41□□□□□ -0.1
Foxf1Q61080 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Foxf1Q61080 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.41□□□□□ -0.1
Foxf1Q61080 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.4□□□□□ -0.1
Foxf1Q61080 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms