Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom1Q5SX79 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Gm7367-201ENSMUST00000057611 492 ntBASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shroom1Q5SX79 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shroom1Q5SX79 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Shroom1Q5SX79 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shroom1Q5SX79 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shroom1Q5SX79 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Gm33142-201ENSMUST00000193913 867 ntBASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Il3ra-202ENSMUST00000223589 738 ntBASIC18.31■□□□□ 0.52
Shroom1Q5SX79 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Gm10819-201ENSMUST00000099988 561 ntBASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shroom1Q5SX79 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Gm37025-201ENSMUST00000195159 829 ntBASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms