Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-2Q5R1I4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Gm17808-201ENSMUST00000200859 894 ntBASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-2Q5R1I4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-2Q5R1I4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Mir8112-201ENSMUST00000184382 131 ntBASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trav6-2Q5R1I4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-2Q5R1I4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Gm11950-201ENSMUST00000121615 838 ntBASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 Gm17807-201ENSMUST00000186869 298 ntBASIC15.14■□□□□ 0.01
Trav6-2Q5R1I4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms