Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7d-4Q5R1H9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.21□□□□□ -0.3
Trav7d-4Q5R1H9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7d-4Q5R1H9 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.21□□□□□ -0.3
Trav7d-4Q5R1H9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7d-4Q5R1H9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7d-4Q5R1H9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7d-4Q5R1H9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7d-4Q5R1H9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav7d-4Q5R1H9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Gm22325-201ENSMUST00000158904 308 ntBASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Smad6-203ENSMUST00000179458 273 ntBASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav7d-4Q5R1H9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav7d-4Q5R1H9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms