Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav5d-4Q5R1F6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Gm18666-201ENSMUST00000190039 958 ntBASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav5d-4Q5R1F6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav5d-4Q5R1F6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav5d-4Q5R1F6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav5d-4Q5R1F6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav5d-4Q5R1F6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav5d-4Q5R1F6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Trav5d-4Q5R1F6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav5d-4Q5R1F6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms