Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav6-3Q5R1E6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-3Q5R1E6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-3Q5R1E6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Haglr-201ENSMUST00000100000 2085 ntBASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-3Q5R1E6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Trav6-3Q5R1E6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-3Q5R1E6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.83□□□□□ -0.19
Trav6-3Q5R1E6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms