Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav8d-2Q5R1B6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8d-2Q5R1B6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Notumos-201ENSMUST00000151998 2659 ntBASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Mir8112-201ENSMUST00000184382 131 ntBASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Gm37935-201ENSMUST00000192012 982 ntBASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8d-2Q5R1B6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav8d-2Q5R1B6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Rps4l-201ENSMUST00000071745 943 ntBASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trav8d-2Q5R1B6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8d-2Q5R1B6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8d-2Q5R1B6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8d-2Q5R1B6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8d-2Q5R1B6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8d-2Q5R1B6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8d-2Q5R1B6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8d-2Q5R1B6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8d-2Q5R1B6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms