Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scarf1Q5ND28 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scarf1Q5ND28 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Gm7370-201ENSMUST00000219471 767 ntBASIC18.86■□□□□ 0.61
Scarf1Q5ND28 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarf1Q5ND28 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarf1Q5ND28 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scarf1Q5ND28 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scarf1Q5ND28 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Scarf1Q5ND28 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scarf1Q5ND28 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Scarf1Q5ND28 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Scarf1Q5ND28 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms